Microbiological Analysis and Antibiotic Resistance in Pathogenic Bacteria Isolated from Artisanal Cheeses Sold in Jaén, Perú
Abstract
Artisanal fresh cheese is a widely consumed food that can become a vehicle for potentially pathogenic and drug-resistant bacteria. The objective of this study was to perform a microbiological analysis and evaluate the antibiotic resistance of pathogenic bacteria from artisanal cheeses collected from markets in Jaén, 2025. The study was descriptive with a quantitative, non-experimental approach. One hundred and twenty samples of fresh cheese (10 grams each) were analyzed for the quantification of total coliforms and mesophilic bacteria from eight markets in the Jaén district. Samples stored for no more than three days and from formal sales outlets were included. The cheese was collected in labeled sterile Ziploc bags and transported under aseptic and refrigerated conditions (4 °C). Serial dilutions were prepared with the 10⁻¹ dilution serving as the stock solution. In addition, the presence of Escherichia coli and Staphylococcus aureus was biochemically demonstrated and extended-spectrum beta- lactamase and methicillin-resistant strains were phenotypically identified, respectively. Among the results, a high microbial load was reported for mesophilic bacteria (4.80 × 10⁵ CFU/g) and total coliforms (1.22 × 10⁴ CFU/g). These results exceeded permissible limits, with the Santa Rosa Market reporting the highest bacterial load. Additionally, S. aureus (35.00 %) and E. coli (21.67 %) were identified in artisanal cheeses. extended- spectrum beta-lactamase-producing E. coli and methicillin- resistant S. aureus were found in 100.00 and 14.29% of the strains, respectively. In conclusion, artisanal fresh cheeses sold in the city of Jaén exhibit high levels of mesophilic bacteria and total coliforms, and the presence of extended-spectrum beta- lactamase -producing E. coli and S. aureus methicillin-resistant strains was also observed.
Downloads
References
Grace D. Burden of foodborne disease in low-income and middle-income countries and opportunities for scaling food safety interventions. Food Secur. [Internet]. 2023; 15(6):1475-1488. doi: https://doi.org/q65p
Organización Mundial de la Salud. Inocuidad de los alimentos [Internet]. Ginebra, Suiza: OMS; 2024. [recuperado 08 Dic 2025]. Disponible en: https://goo.su/WSwGztK
Food and Drug Administration. Organismos que causan enfermedades transmitidas por los alimentos en los EE.UU. [Internet]. Maryland, USA: FDA; 2024 [recuperado 08 Dic 2025];. Disponible en: https://goo.su/g3l7zkU
Unar A, Qureshi M, Afridi HI, Wassan S. The Role of Bacterial Toxins and Environmental Factors in the Development of Food Allergies. Allergies. [Internet]. 2024; 4(4):192-217. doi: https://doi.org/q65q
Ministerio de Salud. Boletín epidemiológico del Perú. [Internet]. Reporte de enfermedades transmitidas por alimentos (ETA) en el Perú, 2019. Centro Nacional de Epidemiología, Prevención y Control de Enfermedades; Vol. 28, SE 15. Lima, Perú: Ministerio de Salud. 2019 [recuperado 08 Dic 2025]; p. 381-383. Disponible en: https://goo.su/nJTzn
Ministerio de Salud. Boletín epidemiológico del Perú. [Internet]. Centro Nacional de Epidemiología, Prevención y Control de Enfermedades; Vol. 34, SE 53. Lima, Perú: Ministerio de Salud. 2025 [recuperado 08 Dic 2025]; 38 p. Disponible en: https://goo.su/TQwh7Y
Barrantes K, Chacón L, Arias AM. El impacto de la resistencia a los antibióticos en el desarrollo sostenible. Poblac. Salud Mesoam. [Internet]. 2022; 19(2):305-329. doi: https://doi.org/p5gq
Davis K, Limato R, Monga M, Egid B, Paul S, Okioma S, Nyamwanza O, Arjyal A, Ahmed ST, Parajuli A, Kwabla MP, Aktar B, Ngunjiri ASW, Hawkins K, Dacombe R, Ahmed SM, Immurana M, Thiomi J, Anumu FE, Mavhu W, Otiso L, Rashid SF, Baral S, Gyapong M, Theobald S, Steege R. Antimicrobial resistance, equity and justice in low- and middle-income countries: an intersectional critical interpretive synthesis. Nat. Commun. [Internet]. 2025; 16(1):9078. doi: https://doi.org/q65r
GBD 2021 Antimicrobial Resistance Collaborators. Global burden of bacterial antimicrobial resistance 1990-2021: a systematic analysis with forecasts to 2050. Lancet. [Internet]. 2024; 404(10459):1199-1226. doi: https://doi.org/nh9w
Al-Khalaifah H, Rahman MH, Al-Surrayai T, Al-Dhumair A, Al-Hasan M. A One-Health Perspective of Antimicrobial Resistance (AMR): Human, Animals and Environmental Health. Life. [Internet]. 2025; 15(10):1598. doi: https://doi.org/q65v
Samtiya M, Matthews KR, Dhewa T, Puniya AK. Antimicrobial Resistance in the Food Chain: Trends, Mechanisms, Pathways, and Possible Regulation Strategies. Foods. [Internet]. 2022; 11(19):2966. doi: https://doi.org/qrqk
Kumar SB, Arnipalli SR, Ziouzenkova O. Antibiotics in Food Chain: The Consequences for Antibiotic Resistance. Antibiotics. [Internet]. 2020; 9(10):688. doi: https://doi.org/gqjnhs
Alfonso-Vargas NC, Aguilera-Becerra A, Jaimes-Bernal CP, Pulido-Medellín MO, Arias-Mosso JMA. Caracterización microbiológica de queso fresco artesanal distribuidos en la Hoya del Río Suárez, Colombia. Duazary. [Internet]. 2024; 21(1):7-18. doi: https://doi.org/q65w
Gajewska J, Chajęcka-Wierzchowska W, Zadernowska A. Occurrence and Characteristics of Staphylococcus aureus strains along the production chain of raw milk cheeses in Poland. Molecules. [Internet]. 2022; 27(19):6569. doi: https://doi.org/q65x
Huamán FTG. Calidad microbiológica de quesos frescos que se expenden en los mercados de Chachapoyas, Perú, 2023. REBIOL. [Internet]. 2023 [recuperado 20 Jan 2026]; 43(2):9-19. Available in: https://goo.su/d0yvtH
Salgado-Caxito M, León D, Bardales O, Jara LM, Medrano P, Murga C, Pérez V, Aylas-Jurado B, Su-Tello R, Najarro J, Salvador-Tasayco E, Farrugia-Audri J, Shiva C, Benavides JA. Unexplained high prevalence of ESBL-Escherichia coli among cattle and pigs in Peru. Antibiotics. [Internet]. 2025; 14(9):867. doi: https://doi.org/q65z
González-Machado C, Capita R, Alonso-Calleja C. Methicillin-Resistant Staphylococcus aureus (MRSA) in dairy products and bulk-tank milk (BTM). Antibiotics. [Internet]. 2024; 13(7):588. doi: https://doi.org/q653
Ministerio de Salud - DIGESA. Manual de Análisis Microbiológico de Alimentos Perú. Lima, Perú: Ministerio de Salud. [Internet]. 2001 [recuperado 08 Dic 2025]; 182 p. Disponible en: https://goo.su/R0k2rJ
Kahlmeter G, Giske CG, Kirn TJ, Sharp SE. Point-counterpoint: Differences between the European Committee on Antimicrobial susceptibility testing and Clinical and Laboratory standards institute recommendations for reporting antimicrobial susceptibility results. J. Clin. Microbiol. [Internet]. 2019; 57(9):1–6. doi: https://doi.org/gh9dfn
Estrada-Hernández CA, Becerra-Cedillo MB, Hernández-Velázquez IA, Mejía-Buenfil HE, Olivera-Martínez T, Salto-González IB, Torres-López F, Quirasco M. Microbiological Evaluation of Two Mexican Artisanal Cheeses: Analysis of Foodborne Pathogenic Bacteria in Cotija Cheese and Bola de Ocosingo Cheese by qPCR. Foods. [Internet]. 2024; 13(17):2824. doi: https://doi.org/q654
Gavilan GXH, Espinoza-Espinoza LA, Vega-Portalatino EJ, Moreno-Quispe LA, Ruiz-Atoche EDP, Valdiviezo-Marcelo J, Ruiz-Flores LA. Impact of socioeconomic and demographic factors on the physicochemical and microbiological quality of artisanal cheeses from northern Peru. Curr. Res. Nutr. Food Sci. [Internet]. 2023; 11(3):1322-1337. doi: https://doi.org/q68n
Arteaga-Solórzano RA, Armenteros-Amaya M, Colas-Chavez M, Pérez-Ruano M, Fimia-Duarte R. Calidad sanitaria de la leche y quesos artesanales elaborados en la provincia de Manabí, Ecuador. Rev. Prod. Anim. [Internet]. 2021 [recuperado 2 Dic 2025]; 33(3):e3925. Disponible en: https://goo.su/JEEbG
Silva FB, Ferreira LC. Quantification of mesophilic aerobic bacteria, coliform bacteria and Staphylococcus aureus and in the production of fresh cheese in a rural community in Brazil. MOJ Public Health. [Internet]. 2022; 11(2):104-106. doi: https://doi.org/q68p
Chambi-Rodríguez AD. Evaluación de la calidad microbiana de los quesos frescos de los mercados de Juliaca – Perú. Unaciencia. [Internet]. 2022; 15(28):25-29. doi: https://doi.org/q68q
LaPointe G, Wilson T, Tarrah A, Gagnon M, Roy D. Biofilm Formation in Dairy: A Food Safety Concern—Microbial community tracking from dairy farm to factory; Insights on biofilm management for enhanced food safety and quality. J. Dairy Sci. [Internet]. 2025; 108(8):8101-8119. doi: https://doi.org/q68r
Possas A, Bonilla-Luque OM, Valero A. From Cheese-Making to Consumption: Exploring the microbial safety of cheeses through predictive microbiology models. Foods. [Internet]. 2021; 10(2):355. doi: https://doi.org/q68s
Sarba EJ, Wirtu W, Gebremedhin EZ, Borena BM, Marami LM. Occurrence and antimicrobial susceptibility patterns of Escherichia coli and Escherichia coli O157 isolated from cow milk and milk products, Ethiopia. Sci. Rep. [Internet]. 2023; 13(1):16018. doi: https://doi.org/q68t
Bustamante K, Lingan L, Montenegro J. Staphylococcus aureus aislados de quesos comercializados en la ciudad de Bagua, Amazonas. Rev. Científ. Dékamu Agropec. [Internet]. 2024; 5(1):53-61. doi: https://doi.org/q68v
Berger TFH, Brasca M, Buchner M, Bütikofer U, Castiglioni B, Cremonesi P, Eliskases-Lechner F, Fritsch L, Morandi S, Schwendimann L. Critical Factors Affecting the Prevalence of Staphylococcus aureus and Staphylococcal Enterotoxins in Raw Milk Cheese in the Alpine Region of Austria, Italy, and Switzerland. Foods. [Internet]. 2025; 14(13):2176. doi: https://doi.org/q68w
Aguiar RAC, Ferreira FA, Rubio MY, Silva NCC, Miotto M, Carvalho MM, Bazzo BR, Botelho LAB, Dias RS, De Dea-Lindner J. Staphylococcus aureus isolated from traditional artisanal raw milk cheese from Southern Brazil: diversity, virulence, and antimicrobial resistance profile. J. Food Prot. [Internet]. 2024; 87(6):100285. doi: https://doi.org/q68x
Cieza MYR, Bonsaglia ECR, Rall VLM, dos Santos MV, Silva NCC. Staphylococcal Enterotoxins: Description and Importance in Food. Pathogens. [Internet]. 2024; 13(8):676. doi: https://doi.org/q68z
Gurgua-Gutiérrez I, Galicia-Jiménez MM, Nieto-Castañeda IG, López-Garrido SJ, Rojas-Herrera RA, Gamboa-Alvarado JG. Caracterización molecular de Staphylococcus aureus SARM en quesos frescos artesanales del mercado de Puerto Escondido. Ecosis. Recur. Agropec. [Internet]. 2024; 11(4):e4064. doi: https://doi.org/q682
González-Machado C, Capita R, Alonso-Calleja C. Methicillin-Resistant Staphylococcus aureus (MRSA) in Dairy Products and Bulk-Tank Milk (BTM). Antibiotics. [Internet]. 2024; 13(7):588. doi: https://doi.org/q653
Vahed-Dehkordi N, Rahimi E, Zia Jahromi N. Prevalence, antimicrobial resistance, virulence gene distribution and SCCmec typing of methicillin-resistant Staphylococcus aureus isolated from raw milk and dairy products. Iran J. Microbiol. [Internet]. 2024; 16(5):605-613. doi: https://doi.org/q683
Morandi S, Silvetti T, Bonazza F, Brasca M. Occurrence and diversity of Shiga toxin-producing Escherichia coli (STEC) in Italian Alpine raw milk cheeses and their development in the earlier stages of different cheese-making processes. LWT Food Sci Technol. [Internet]. 2024; 213:117029. doi: https://doi.org/q684
Kuzeubayeva A, Ussenbayev A, Aydin A, Akanova Z, Rychshanova R, Abdullina E, Seitkamzina D, Sakharia L, and Ruzmatov S. Contamination of Kazakhstan cheeses originating from Escherichia coli and its resistance to antimicrobial drugs. Vet. World. [Internet]. 2024; 17(2):361–370. doi: https://doi.org/q685
Salgado-Caxito M, Léon D, Bardales O, Jara LM, Medrano P, Murga C, Pérez V, Aylas-Jurado B, Su-Tello R, Najarro J, Salvador-Tasayco E, Farrugia-Audri J, Shiva C, Benavides JA. Unexplained High Prevalence of ESBL-Escherichia coli Among Cattle and Pigs in Peru. Antibiotics. [Internet]. 2025; 14(9):867. doi: https://doi.org/q65z
Genet C, Enbiale W, Rommerskirchen A, Abubeker R, Tafere W, Gebre-Eyesus T, Getie M, Tsega A, Acham M, Melese A, Awoke T, Mulu W, Ashagrie D, Amsalu T, Motbainor A, Gebeyehu E, Kibret M, Abera B, Nibret E, Munshe A. Prevalence of extended spectrum β-lactamase and carbapenemase-producing Escherichia coli and Klebsiella pneumoniae in raw bulk cow milk from dairy cooperatives, Northwest Amhara, Ethiopia. PLoS One. [Internet]. 2025; 20(11):e0336987. doi: https://doi.org/q686
















